Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1851 | Not Available | Negative | 2029456 - 2029851 | 14879.6 |
| Trna-asp | Not Available | Not Available | Positive | 2029915 - 2029991 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2030017 - 2030093 | Not Available |
| formyltetrahydrofolate deformylase | M099_1854 | Not Available | Positive | 2030499 - 2031215 | 27927.1 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | M099_1855 | Not Available | Positive | 2031215 - 2031805 | 22270.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | M099_1856 | Not Available | Positive | 2031847 - 2032566 | 26636.3 |
| imidazoleglycerol phosphate synthase, cyclase subunit | M099_1857 | Not Available | Positive | 2032576 - 2033331 | 27219.5 |
| phosphoribosyl-atp diphosphatase | M099_1858 | Not Available | Positive | 2033496 - 2034107 | 23137.6 |
| abc transporter family protein | M099_1859 | Not Available | Positive | 2034112 - 2034867 | 28405.2 |
| aspartate kinase domain protein | M099_1860 | Not Available | Positive | 2034975 - 2036294 | 49296.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

