Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1839 | Not Available | Negative | 2018643 - 2018801 | 5679.23 |
| tonb-dependent receptor plug domain protein | M099_1840 | Not Available | Negative | 2018806 - 2019609 | 29773.7 |
| cna b-type domain protein | M099_1841 | Not Available | Negative | 2019697 - 2019885 | 6465.12 |
| beta-eliminating lyase family protein | M099_1842 | Not Available | Positive | 2020051 - 2021067 | 37822.4 |
| hypothetical protein | M099_1845 | Not Available | Negative | 2022305 - 2022433 | 4681.87 |
| hypothetical protein | M099_1846 | Not Available | Negative | 2023675 - 2023803 | 4664.57 |
| putative beta-galactosidase | M099_1847 | Not Available | Negative | 2024245 - 2026284 | 78030.9 |
| outer membrane beta-barrel domain protein | M099_1848 | Not Available | Negative | 2026581 - 2027258 | 25316.8 |
| hypothetical protein | M099_1849 | Not Available | Positive | 2027743 - 2027931 | 7146.55 |
| transposase dde domain protein | M099_1850 | Not Available | Positive | 2028109 - 2029014 | 35030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

