Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mobilization protein bmph | M099_1832 | Not Available | Positive | 2010005 - 2010835 | 32195.7 |
| hypothetical protein | M099_1833 | Not Available | Positive | 2011160 - 2012284 | 42928.3 |
| hypothetical protein | M099_1834 | Not Available | Positive | 2012312 - 2012491 | 6528.34 |
| hypothetical protein | M099_1835 | Not Available | Positive | 2012529 - 2013143 | 22802.2 |
| kwg leptospira family protein | M099_1836 | Not Available | Positive | 2013162 - 2015051 | 72134.6 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 2015157 - 2015552 | Not Available |
| Tmrna,resume consensus sequence (at 392): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 2015337 - 2015855 | Not Available |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 2015764 - 2016158 | Not Available |
| hypothetical protein | M099_1837 | Not Available | Positive | 2016299 - 2017465 | 42700.8 |
| mannose-6-phosphate isomerase, class i | M099_1838 | Not Available | Negative | 2017558 - 2018529 | 36186.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

