Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthesis cobw c-terminal domain protein | M099_1822 | Not Available | Negative | 2001053 - 2002240 | 45145.8 |
| alpha-l-fucosidase family protein | M099_1823 | Not Available | Positive | 2002494 - 2003777 | 48882.9 |
| phage integrase family protein | M099_1824 | Not Available | Positive | 2004129 - 2005421 | 50505.0 |
| hypothetical protein | M099_1825 | Not Available | Positive | 2005445 - 2006443 | 39314.7 |
| hypothetical protein | M099_1826 | Not Available | Negative | 2006482 - 2006625 | 5178.29 |
| hypothetical protein | M099_1827 | Not Available | Positive | 2006703 - 2006972 | 9655.77 |
| aaa domain protein | M099_1828 | Not Available | Positive | 2006984 - 2008051 | 40126.8 |
| toprim-like family protein | M099_1829 | Not Available | Positive | 2008335 - 2009303 | 37100.0 |
| hypothetical protein | M099_1830 | Not Available | Negative | 2009326 - 2009793 | 16826.1 |
| putative mobilization protein | M099_1831 | Not Available | Positive | 2009806 - 2009997 | 7108.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

