Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferases group 1 family protein | M099_1811 | Not Available | Positive | 1991423 - 1992604 | 45019.8 |
| glycosyl transferases group 1 family protein | M099_1812 | Not Available | Positive | 1992693 - 1993799 | 41648.8 |
| polysaccharide pyruvyl transferase family protein | M099_1813 | Not Available | Positive | 1993796 - 1994833 | 39137.6 |
| glycosyl transferases group 1 family protein | M099_1814 | Not Available | Positive | 1994863 - 1996122 | 48188.3 |
| putative membrane protein | M099_1815 | Not Available | Positive | 1996127 - 1997326 | 46528.9 |
| acyltransferase family protein | M099_1816 | Not Available | Positive | 1997313 - 1998182 | 33573.3 |
| hypothetical protein | M099_1817 | Not Available | Negative | 1998238 - 1998435 | 7710.61 |
| Trna-pseudo | Not Available | Not Available | Positive | 1998985 - 1999058 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1999073 - 1999149 | Not Available |
| transposase, mutator family protein | M099_1821 | Not Available | Positive | 2000488 - 2000996 | 19835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

