Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusg family protein | M099_1801 | Not Available | Positive | 1980426 - 1980986 | 21687.6 |
| glycosyl transferase 4 family protein | M099_1802 | Not Available | Positive | 1981049 - 1982170 | 41341.5 |
| polysaccharide biosynthesis/export family protein | M099_1803 | Not Available | Positive | 1982184 - 1982975 | 29199.4 |
| capsular exopolysaccharide family domain protein | M099_1804 | Not Available | Positive | 1982990 - 1985404 | 90245.3 |
| php domain protein | M099_1805 | Not Available | Positive | 1985497 - 1986168 | 25477.8 |
| acyltransferase family protein | M099_1806 | Not Available | Positive | 1986559 - 1987242 | 26436.0 |
| polysaccharide biosynthesis family protein | M099_1807 | Not Available | Positive | 1987549 - 1989087 | 57483.8 |
| polysaccharide pyruvyl transferase family protein | M099_1808 | Not Available | Positive | 1989080 - 1989997 | 35042.2 |
| atpase associated with various cellular activities family protein | M099_1809 | Not Available | Positive | 1990177 - 1990461 | 10787.2 |
| aaa atpase, central region domain protein | M099_1810 | Not Available | Positive | 1990661 - 1990948 | 10600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

