Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1791 | Not Available | Positive | 1975283 - 1975459 | 6473.84 |
| hypothetical protein | M099_1792 | Not Available | Positive | 1975469 - 1975615 | 5745.89 |
| hypothetical protein | M099_1793 | Not Available | Negative | 1975581 - 1976342 | 27812.4 |
| bacterial mobilization family protein | M099_1794 | Not Available | Positive | 1976336 - 1976707 | 13686.9 |
| relaxase/mobilization nuclease domain protein | M099_1795 | Not Available | Positive | 1976712 - 1977632 | 35085.9 |
| hypothetical protein | M099_1796 | Not Available | Positive | 1977663 - 1978424 | 29138.8 |
| hypothetical protein | M099_1797 | Not Available | Negative | 1978411 - 1978572 | 5995.19 |
| phage integrase family protein | M099_1798 | Not Available | Positive | 1978642 - 1979646 | 38384.5 |
| hypothetical protein | M099_1799 | Not Available | Negative | 1979812 - 1979928 | 4551.39 |
| hypothetical protein | M099_1800 | Not Available | Positive | 1980282 - 1980410 | 4913.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

