Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | M099_1781 | Not Available | Positive | 1969973 - 1970644 | 25250.7 |
| hypothetical protein | M099_1782 | Not Available | Positive | 1970634 - 1971170 | 21033.1 |
| kila-n domain protein | M099_1783 | Not Available | Positive | 1971137 - 1971940 | 30768.0 |
| hypothetical protein | M099_1784 | Not Available | Negative | 1972064 - 1972378 | 11831.1 |
| hypothetical protein | M099_1785 | Not Available | Positive | 1972648 - 1973208 | 22212.6 |
| hypothetical protein | M099_1786 | Not Available | Positive | 1973483 - 1973677 | 6977.0 |
| hypothetical protein | M099_1787 | Not Available | Positive | 1973644 - 1973823 | 6260.68 |
| merr hth regulatory family protein | M099_1788 | Not Available | Negative | 1974162 - 1974485 | 12499.0 |
| hypothetical protein | M099_1789 | Not Available | Negative | 1974522 - 1974794 | 10105.9 |
| helix-turn-helix domain protein | M099_1790 | Not Available | Negative | 1974816 - 1975127 | 12135.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

