Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase family protein | M099_0153 | Not Available | Negative | 171859 - 172443 | 21446.7 |
| sir2 family protein | M099_0154 | Not Available | Positive | 172571 - 173269 | 25715.8 |
| rubredoxin | M099_0155 | Not Available | Positive | 173344 - 173508 | 5868.75 |
| polyribonucleotide nucleotidyltransferase | M099_0156 | Not Available | Negative | 173693 - 175828 | 78631.8 |
| ahpc/tsa family protein | M099_0157 | Not Available | Positive | 176065 - 177192 | 41993.2 |
| transcription elongation factor grea domain protein | M099_0158 | Not Available | Positive | 177393 - 177857 | 16780.4 |
| hit domain protein | M099_0159 | Not Available | Positive | 177909 - 178316 | 15026.2 |
| nucleotidyl transferase family protein | M099_0160 | Not Available | Negative | 178405 - 179448 | 39479.2 |
| Trna-leu | Not Available | Not Available | Positive | 179633 - 179719 | Not Available |
| hypothetical protein | M099_0162 | Not Available | Positive | 179892 - 180038 | 5643.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

