Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1761 | Not Available | Positive | 1940781 - 1941167 | 15266.2 |
| hypothetical protein | M099_1762 | Not Available | Negative | 1941214 - 1941342 | 5034.64 |
| putative permease yjgp/yjgq family protein | M099_1763 | Not Available | Positive | 1941344 - 1943149 | 68741.4 |
| gtp cyclohydrolase ii | M099_1764 | Not Available | Positive | 1943152 - 1944366 | 44935.4 |
| degt/dnrj/eryc1/strs aminotransferase family protein | M099_1765 | Not Available | Positive | 1944492 - 1945685 | 43067.4 |
| ferredoxin | M099_1766 | Not Available | Negative | 1945863 - 1946030 | 5717.65 |
| beta-lactamase family protein | M099_1767 | Not Available | Negative | 1946148 - 1949075 | 109578.0 |
| calcineurin-like phosphoesterase family protein | M099_1768 | Not Available | Negative | 1949172 - 1950014 | 31282.2 |
| 5'-nucleotidase, c-terminal domain protein | M099_1769 | Not Available | Negative | 1950026 - 1950787 | 27142.6 |
| ribosomal protein l19 | M099_1770 | Not Available | Positive | 1951003 - 1951356 | 13130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

