Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpr repeat family protein | M099_1751 | Not Available | Negative | 1935097 - 1936440 | 51719.5 |
| tonb family c-terminal domain protein | M099_1752 | Not Available | Negative | 1936451 - 1938337 | 70633.1 |
| penicillinase repressor family protein | M099_1753 | Not Available | Negative | 1938371 - 1938733 | 14012.8 |
| glycoside hydrolase family 88 domain protein | M099_1754 | Not Available | Negative | 1938944 - 1939231 | 10636.1 |
| hypothetical protein | M099_1755 | Not Available | Negative | 1939269 - 1939385 | 4266.34 |
| hypothetical protein | M099_1756 | Not Available | Positive | 1939529 - 1939834 | 10789.0 |
| hypothetical protein | M099_1757 | Not Available | Negative | 1939806 - 1939934 | 4982.16 |
| hypothetical protein | M099_1758 | Not Available | Negative | 1940060 - 1940185 | 4861.88 |
| Trna-met | Not Available | Not Available | Positive | 1940369 - 1940442 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1940501 - 1940577 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

