Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | M099_1741 | Not Available | Positive | 1924679 - 1925446 | 27740.6 |
| plasmid pria4b orf-3-like family protein | M099_1742 | Not Available | Positive | 1925509 - 1926072 | 21611.7 |
| trna dimethylallyltransferase | M099_1743 | Not Available | Positive | 1926124 - 1927026 | 35088.3 |
| alpha-l-fucosidase family protein | M099_1744 | Not Available | Positive | 1927035 - 1929074 | 76756.4 |
| hypothetical protein | M099_1745 | Not Available | Negative | 1929252 - 1929728 | 18861.7 |
| transposase dde domain protein | M099_1746 | Not Available | Positive | 1929868 - 1931154 | 49642.2 |
| hypothetical protein | M099_1747 | Not Available | Negative | 1931300 - 1931413 | 4275.97 |
| hypothetical protein | M099_1748 | Not Available | Positive | 1931487 - 1931636 | 5370.56 |
| ahpc/tsa family protein | M099_1749 | Not Available | Negative | 1931745 - 1933853 | 80295.8 |
| ahpc/tsa family protein | M099_1750 | Not Available | Negative | 1933876 - 1935066 | 44917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

