Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1731 | Not Available | Negative | 1914269 - 1914418 | 5478.68 |
| virulence rhum family protein | M099_1732 | Not Available | Negative | 1914559 - 1915557 | 39569.0 |
| hypothetical protein | M099_1733 | Not Available | Negative | 1915560 - 1916153 | 22584.9 |
| hypothetical protein | M099_1734 | Not Available | Negative | 1916496 - 1916627 | 5215.55 |
| putative phosphoribosylformylglycinamidine cyclo-ligase | M099_1735 | Not Available | Positive | 1917392 - 1918561 | 42693.2 |
| peptide chain release factor 1 | M099_1736 | Not Available | Positive | 1918804 - 1919919 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | M099_1737 | Not Available | Positive | 1919956 - 1920774 | 30601.6 |
| phosphohydrolase | M099_1738 | Not Available | Positive | 1920863 - 1922098 | 47212.3 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | M099_1739 | Not Available | Positive | 1922231 - 1923271 | 36895.4 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | M099_1740 | Not Available | Positive | 1923277 - 1924662 | 51127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

