Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter family protein | M099_1721 | Not Available | Positive | 1901313 - 1901885 | 21054.4 |
| hypothetical protein | M099_1722 | Not Available | Negative | 1901961 - 1902074 | 3893.82 |
| hypothetical protein | M099_1723 | Not Available | Negative | 1902172 - 1903539 | 53077.1 |
| excinuclease abc subunit a | M099_1724 | Not Available | Positive | 1903753 - 1906554 | 104858.0 |
| endonuclease/exonuclease/phosphatase family protein | M099_1725 | Not Available | Positive | 1906800 - 1907831 | 39607.7 |
| pa14 domain protein | M099_1726 | Not Available | Positive | 1907927 - 1910194 | 84374.2 |
| outer membrane beta-barrel domain protein | M099_1727 | Not Available | Negative | 1910304 - 1910795 | 17873.6 |
| putative membrane protein | M099_1728 | Not Available | Negative | 1910814 - 1911035 | 8766.94 |
| carbon starvation csta family protein | M099_1729 | Not Available | Negative | 1911022 - 1912452 | 52225.5 |
| putative glycosyl hydrolase domain protein | M099_1730 | Not Available | Positive | 1912639 - 1914210 | 60064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

