Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | M099_1701 | Not Available | Negative | 1874080 - 1875729 | 61999.3 |
| transglutaminase-like superfamily protein | M099_1702 | Not Available | Negative | 1875732 - 1877243 | 58282.2 |
| signal peptidase i | M099_1703 | Not Available | Negative | 1877245 - 1878147 | 35333.0 |
| hypothetical protein | M099_1704 | Not Available | Negative | 1878156 - 1880060 | 73740.6 |
| putative exported protein | M099_1705 | Not Available | Negative | 1880340 - 1881425 | 41597.9 |
| hypothetical protein | M099_1706 | Not Available | Negative | 1882013 - 1882879 | 33029.6 |
| nveala family protein | M099_1707 | Not Available | Negative | 1882883 - 1883104 | 7943.79 |
| hypothetical protein | M099_1708 | Not Available | Negative | 1883267 - 1883383 | 4580.75 |
| transcriptional regulatory family protein | M099_1709 | Not Available | Positive | 1883358 - 1884356 | 38291.5 |
| hypothetical protein | M099_1710 | Not Available | Negative | 1885099 - 1886178 | 40319.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

