Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam methylthiotransferase, miab/rimo family protein | M099_1651 | Not Available | Negative | 1808292 - 1809608 | 49152.8 |
| amp-binding enzyme family protein | M099_1652 | Not Available | Positive | 1809714 - 1811387 | 63285.5 |
| putative lipoprotein | M099_1653 | Not Available | Positive | 1811548 - 1811748 | 6663.71 |
| hypothetical protein | M099_1654 | Not Available | Negative | 1811762 - 1811893 | 5046.27 |
| hypothetical protein | M099_1655 | Not Available | Positive | 1811903 - 1812595 | 26978.2 |
| ribosomal protein l9 | M099_1656 | Not Available | Negative | 1812665 - 1813108 | 16159.9 |
| ribosomal protein s18 | M099_1657 | Not Available | Negative | 1813124 - 1813393 | 10561.2 |
| ribosomal protein s6 | M099_1658 | Not Available | Negative | 1813396 - 1813740 | 13428.3 |
| hypothetical protein | M099_1659 | Not Available | Negative | 1813859 - 1813993 | 5266.56 |
| marr family protein | M099_1660 | Not Available | Positive | 1813950 - 1814396 | 17228.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

