Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce related family protein | M099_1641 | Not Available | Positive | 1792683 - 1793570 | 32671.6 |
| chromosomal replication initiator protein dnaa | M099_1642 | Not Available | Positive | 1794088 - 1795314 | 46431.9 |
| putative oxidase | M099_1643 | Not Available | Negative | 1795399 - 1796139 | 28410.1 |
| ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent | M099_1644 | Not Available | Positive | 1796483 - 1799029 | 96377.2 |
| transposase dde domain protein | M099_1645 | Not Available | Positive | 1799992 - 1800798 | 31629.1 |
| hypothetical protein | M099_1646 | Not Available | Negative | 1800965 - 1802323 | 53151.0 |
| asma-like family protein | M099_1647 | Not Available | Negative | 1802618 - 1805590 | 110660.0 |
| dihydroneopterin aldolase | M099_1648 | Not Available | Positive | 1805767 - 1806120 | 13427.1 |
| radical sam superfamily protein | M099_1649 | Not Available | Negative | 1806262 - 1807143 | 33160.9 |
| glycosyl transferase 2 family protein | M099_1650 | Not Available | Negative | 1807231 - 1808247 | 38995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

