Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobq/cobb/mind/para nucleotide binding domain protein | M099_1631 | Not Available | Positive | 1783414 - 1784130 | 26437.5 |
| low molecular weight phosphotyrosine phosphatase family protein | M099_1632 | Not Available | Positive | 1784135 - 1784563 | 15960.2 |
| sodium bile acid symporter family protein | M099_1633 | Not Available | Positive | 1784861 - 1785622 | 27606.9 |
| hypothetical protein | M099_1634 | Not Available | Positive | 1785601 - 1785714 | 4127.29 |
| transposase, mutator family protein | M099_1635 | Not Available | Negative | 1785892 - 1787124 | 46997.8 |
| tonb-dependent receptor plug domain protein | M099_1636 | Not Available | Negative | 1787217 - 1789394 | 81758.6 |
| hypothetical protein | M099_1637 | Not Available | Positive | 1789663 - 1789782 | 4123.86 |
| hypothetical protein | M099_1638 | Not Available | Negative | 1789911 - 1790138 | 8722.8 |
| sodium bile acid symporter family protein | M099_1639 | Not Available | Negative | 1790321 - 1791271 | 35211.1 |
| n-acetylmuramoyl-l-alanine amidase family protein | M099_1640 | Not Available | Positive | 1791434 - 1792663 | 46283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

