Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain family protein | M099_1621 | Not Available | Positive | 1776656 - 1778038 | 51240.5 |
| hypothetical protein | M099_1622 | Not Available | Positive | 1778323 - 1778628 | 10798.8 |
| rna pseudouridylate synthase family protein | M099_1623 | Not Available | Negative | 1778693 - 1779364 | 25519.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | M099_1624 | Not Available | Negative | 1779366 - 1780112 | 25964.4 |
| bacterial regulatory s, tetr family protein | M099_1625 | Not Available | Negative | 1780144 - 1780743 | 22662.3 |
| Trna-met | Not Available | Not Available | Positive | 1780975 - 1781050 | Not Available |
| hypothetical protein | M099_1627 | Not Available | Negative | 1781140 - 1781271 | 5157.11 |
| hypothetical protein | M099_1628 | Not Available | Positive | 1781349 - 1781468 | 4762.66 |
| transposase family protein | M099_1629 | Not Available | Negative | 1781489 - 1781773 | 11118.5 |
| transposase dde domain protein | M099_1630 | Not Available | Negative | 1781986 - 1783272 | 49642.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

