Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic binding s and sugar binding domain of laci family protein | M099_1601 | Not Available | Negative | 1745021 - 1745839 | 30043.4 |
| ureide permease family protein | M099_1602 | Not Available | Negative | 1745877 - 1746893 | 35979.8 |
| l-fucose isomerase, c-terminal domain protein | M099_1603 | Not Available | Negative | 1746906 - 1748330 | 52345.9 |
| glycerol kinase | M099_1604 | Not Available | Negative | 1748364 - 1749809 | 53433.2 |
| transketolase, pyrimidine binding domain protein | M099_1605 | Not Available | Negative | 1749886 - 1750824 | 33653.6 |
| transketolase, thiamine diphosphate binding domain protein | M099_1606 | Not Available | Negative | 1750814 - 1751659 | 31397.7 |
| bacterial regulatory, arsr family protein | M099_1607 | Not Available | Negative | 1752002 - 1752757 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | M099_1608 | Not Available | Negative | 1752769 - 1753383 | 22197.7 |
| cellulase family protein | M099_1609 | Not Available | Negative | 1753505 - 1755109 | 61912.9 |
| response regulator | M099_1610 | Not Available | Negative | 1755274 - 1759596 | 165154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

