Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase family protein | M099_0133 | Not Available | Positive | 150890 - 151324 | 15780.1 |
| tpr repeat family protein | M099_0134 | Not Available | Positive | 151334 - 153142 | 69691.2 |
| hypothetical protein | M099_0135 | Not Available | Positive | 153139 - 153972 | 31409.1 |
| peptidase m23 family protein | M099_0136 | Not Available | Positive | 153972 - 155306 | 50696.0 |
| hypothetical protein | M099_0137 | Not Available | Positive | 155361 - 155489 | 4619.47 |
| rna recognition motif family protein | M099_0138 | Not Available | Positive | 155808 - 156179 | 13160.2 |
| glutaminase a | M099_0139 | Not Available | Negative | 156494 - 157408 | 34090.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | M099_0140 | Not Available | Negative | 157421 - 159265 | 68172.6 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | M099_0141 | Not Available | Negative | 159349 - 159858 | 17745.0 |
| glycine cleavage system h protein | M099_0142 | Not Available | Negative | 159983 - 160363 | 14151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

