Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine carboxylase pi chain family protein | M099_1561 | Not Available | Positive | 1703828 - 1704436 | 22164.6 |
| hypothetical protein | M099_1562 | Not Available | Negative | 1704516 - 1704926 | 14751.8 |
| putative dna mismatch repair protein | M099_1563 | Not Available | Negative | 1704954 - 1706042 | 41096.4 |
| trna ribosyltransferase-isomerase | M099_1564 | Not Available | Positive | 1706107 - 1707324 | 46272.3 |
| hypothetical protein | M099_1565 | Not Available | Positive | 1707466 - 1707588 | 4883.14 |
| urocanate hydratase | M099_1566 | Not Available | Positive | 1707850 - 1709847 | 74543.1 |
| glutamate formiminotransferase | M099_1567 | Not Available | Positive | 1709930 - 1710832 | 33343.4 |
| gxxexxy family protein | M099_1568 | Not Available | Positive | 1710859 - 1711236 | 14789.8 |
| imidazolonepropionase | M099_1569 | Not Available | Positive | 1711274 - 1712518 | 44903.3 |
| formiminotransferase-cyclodeaminase family protein | M099_1570 | Not Available | Positive | 1712539 - 1713162 | 22967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

