Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1551 | Not Available | Negative | 1695319 - 1695438 | 4555.61 |
| hypothetical protein | M099_1552 | Not Available | Negative | 1695428 - 1695970 | 19666.0 |
| signal peptidase i | M099_1553 | Not Available | Negative | 1696124 - 1696945 | 32028.7 |
| hypothetical protein | M099_1554 | Not Available | Negative | 1696942 - 1697520 | 22821.9 |
| hypothetical protein | M099_1555 | Not Available | Negative | 1697517 - 1698437 | 34749.4 |
| nveala family protein | M099_1556 | Not Available | Negative | 1698660 - 1698920 | 9561.44 |
| electron transfer flavodomain protein | M099_1557 | Not Available | Positive | 1699287 - 1700180 | 31873.2 |
| electron transfer flavoprotein alpha-subunit | M099_1558 | Not Available | Positive | 1700186 - 1701205 | 36698.3 |
| four helix bundle family protein | M099_1559 | Not Available | Positive | 1701241 - 1701621 | 14337.4 |
| acyl-coa dehydrogenase family protein | M099_1560 | Not Available | Positive | 1701663 - 1703369 | 63864.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

