Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane family protein | M099_1541 | Not Available | Negative | 1678492 - 1679934 | 54273.6 |
| tonb-linked outer membrane, susc/raga family protein | M099_1542 | Not Available | Negative | 1679996 - 1683241 | 119623.0 |
| hypothetical protein | M099_1543 | Not Available | Negative | 1683681 - 1684043 | 14036.2 |
| cna b-type domain protein | M099_1544 | Not Available | Negative | 1684188 - 1686497 | 87894.3 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein | M099_1545 | Not Available | Positive | 1686668 - 1688164 | 56817.7 |
| mechanosensitive ion channel family protein | M099_1546 | Not Available | Negative | 1688283 - 1689476 | 45202.9 |
| hypothetical protein | M099_1547 | Not Available | Negative | 1689464 - 1689592 | 5049.14 |
| rnd transporter, hydrophobe/amphiphile efflux-1 family protein | M099_1548 | Not Available | Negative | 1689593 - 1692709 | 112570.0 |
| efflux transporter, rnd family, mfp subunit | M099_1549 | Not Available | Negative | 1692714 - 1693844 | 41358.6 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | M099_1550 | Not Available | Negative | 1693899 - 1695296 | 52018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

