Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1521 | Not Available | Positive | 1648192 - 1648350 | 6083.39 |
| hypothetical protein | M099_1522 | Not Available | Negative | 1648389 - 1648544 | 5827.96 |
| hypothetical protein | M099_1523 | Not Available | Positive | 1648557 - 1648748 | 7340.83 |
| polyphosphate kinase 1 | M099_1524 | Not Available | Negative | 1648774 - 1650828 | 80560.6 |
| phosphodiesterase, mj0936 family protein | M099_1525 | Not Available | Positive | 1650886 - 1651383 | 18707.5 |
| dtdp-glucose 4,6-dehydratase | M099_1526 | Not Available | Positive | 1651432 - 1652571 | 43722.0 |
| tonb-linked outer membrane, susc/raga family protein | M099_1527 | Not Available | Positive | 1653043 - 1656135 | 115070.0 |
| starch-binding associating with outer membrane family protein | M099_1528 | Not Available | Positive | 1656148 - 1657965 | 68245.8 |
| hypothetical protein | M099_1529 | Not Available | Positive | 1657971 - 1658117 | 5548.84 |
| beta galactosidase small chain family protein | M099_1530 | Not Available | Negative | 1658152 - 1661382 | 122498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

