Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpr repeat family protein | M099_1511 | Not Available | Positive | 1638162 - 1640036 | 73362.7 |
| hypothetical protein | M099_1512 | Not Available | Positive | 1640310 - 1640591 | 10290.1 |
| hypothetical protein | M099_1513 | Not Available | Positive | 1640645 - 1640848 | 7990.53 |
| abc transporter family protein | M099_1514 | Not Available | Positive | 1641003 - 1643204 | 83592.8 |
| hlyd secretion family protein | M099_1515 | Not Available | Positive | 1643254 - 1644396 | 43823.5 |
| hypothetical protein | M099_1516 | Not Available | Positive | 1644430 - 1644630 | 7419.48 |
| radical sam additional 4fe4s-binding spasm domain protein | M099_1517 | Not Available | Positive | 1644608 - 1646119 | 58154.3 |
| peptidase c39 family protein | M099_1518 | Not Available | Positive | 1646112 - 1646693 | 23420.5 |
| hypothetical protein | M099_1519 | Not Available | Negative | 1646659 - 1647051 | 14719.8 |
| hypothetical protein | M099_1520 | Not Available | Positive | 1647739 - 1648023 | 10631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

