Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillinase repressor family protein | M099_1491 | Not Available | Positive | 1617720 - 1618085 | 14087.0 |
| tonb family c-terminal domain protein | M099_1492 | Not Available | Positive | 1618108 - 1619958 | 69497.6 |
| cobq/cobb/mind/para nucleotide binding domain protein | M099_1493 | Not Available | Negative | 1620026 - 1621126 | 39645.1 |
| methyltransferase family protein | M099_1494 | Not Available | Negative | 1621137 - 1621895 | 29773.6 |
| hypothetical protein | M099_1495 | Not Available | Negative | 1622018 - 1622644 | 23245.0 |
| branched-chain amino acid aminotransferase | M099_1496 | Not Available | Negative | 1622662 - 1623681 | 37876.2 |
| exonuclease vii small subunit | M099_1497 | Not Available | Negative | 1623862 - 1624065 | 7823.46 |
| exodeoxyribonuclease vii, large subunit | M099_1498 | Not Available | Negative | 1624074 - 1625381 | 49535.8 |
| subtilase family protein | M099_1499 | Not Available | Negative | 1625381 - 1626754 | 49946.9 |
| hypothetical protein | M099_1500 | Not Available | Negative | 1626812 - 1626955 | 5141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

