Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1481 | Not Available | Positive | 1606364 - 1607542 | 47577.2 |
| parb-like nuclease domain protein | M099_1482 | Not Available | Positive | 1607539 - 1608051 | 19744.9 |
| glug motif family protein | M099_1483 | Not Available | Positive | 1608079 - 1609863 | 65156.6 |
| malate dehydrogenase, nad-dependent | M099_1484 | Not Available | Negative | 1609961 - 1610902 | 32849.0 |
| hypothetical protein | M099_1485 | Not Available | Positive | 1611059 - 1611931 | 33451.4 |
| outer membrane efflux family protein | M099_1486 | Not Available | Positive | 1612147 - 1613610 | 53453.8 |
| efflux transporter, rnd family, mfp subunit | M099_1487 | Not Available | Positive | 1613637 - 1614623 | 35945.9 |
| abc-2 type transporter family protein | M099_1488 | Not Available | Positive | 1614630 - 1615805 | 44257.0 |
| abc-2 type transporter family protein | M099_1489 | Not Available | Positive | 1615820 - 1617070 | 47511.7 |
| lipoprotein | M099_1490 | Not Available | Positive | 1617109 - 1617534 | 15727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

