Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | M099_1471 | Not Available | Negative | 1591155 - 1592345 | 42903.4 |
| malic enzyme, nad binding domain protein | M099_1472 | Not Available | Positive | 1592818 - 1595103 | 84255.2 |
| glutamate/leucine/phenylalanine/valine dehydrogenase family protein | M099_1473 | Not Available | Positive | 1595570 - 1596904 | 48972.7 |
| hypothetical protein | M099_1474 | Not Available | Positive | 1597060 - 1598208 | 42381.6 |
| outer membrane beta-barrel domain protein | M099_1475 | Not Available | Positive | 1598217 - 1598993 | 29116.1 |
| hypothetical protein | M099_1476 | Not Available | Negative | 1599038 - 1599184 | 5532.03 |
| hypothetical protein | M099_1477 | Not Available | Negative | 1599850 - 1601055 | 43512.6 |
| response regulator | M099_1478 | Not Available | Negative | 1601165 - 1604095 | 111898.0 |
| nad-specific glutamate dehydrogenase | M099_1479 | Not Available | Positive | 1604357 - 1605694 | 48494.3 |
| hypothetical protein | M099_1480 | Not Available | Positive | 1605919 - 1606248 | 12795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

