Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-like lipase/acylhydrolase family protein | M099_1461 | Not Available | Negative | 1576533 - 1577453 | 34379.6 |
| hypothetical protein | M099_1462 | Not Available | Negative | 1577482 - 1578849 | 50814.9 |
| hypothetical protein | M099_1463 | Not Available | Negative | 1578986 - 1579279 | 11224.5 |
| mmpl family protein | M099_1464 | Not Available | Negative | 1579352 - 1582486 | 114494.0 |
| efflux transporter, rnd family, mfp subunit | M099_1465 | Not Available | Negative | 1582604 - 1583626 | 37658.9 |
| outer membrane efflux family protein | M099_1466 | Not Available | Negative | 1583650 - 1584975 | 49635.6 |
| bacterial regulatory s, tetr family protein | M099_1467 | Not Available | Negative | 1585012 - 1585665 | 25440.8 |
| bacterial transferase hexapeptide family protein | M099_1468 | Not Available | Negative | 1585695 - 1586462 | 27537.9 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | M099_1469 | Not Available | Negative | 1586486 - 1587886 | 51024.1 |
| rnd transporter, hydrophobe/amphiphile efflux-1 family protein | M099_1470 | Not Available | Negative | 1587883 - 1591101 | 116875.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

