Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily protein | M099_1441 | Not Available | Positive | 1560423 - 1562060 | 62789.8 |
| putative mobilization protein | M099_1442 | Not Available | Positive | 1562841 - 1563275 | 17195.9 |
| putative membrane protein | M099_1443 | Not Available | Positive | 1563659 - 1563856 | 7876.96 |
| starch-binding associating with outer membrane family protein | M099_1444 | Not Available | Positive | 1563888 - 1566113 | 83830.4 |
| fic/doc family protein | M099_1445 | Not Available | Negative | 1566305 - 1566691 | 15160.4 |
| phage integrase family protein | M099_1446 | Not Available | Positive | 1566744 - 1567346 | 22684.3 |
| hypothetical protein | M099_1447 | Not Available | Positive | 1567372 - 1567581 | 7848.46 |
| hypothetical protein | M099_1448 | Not Available | Positive | 1568148 - 1568513 | 14297.3 |
| marr family protein | M099_1449 | Not Available | Negative | 1568730 - 1569176 | 17085.9 |
| hypothetical protein | M099_1450 | Not Available | Positive | 1569210 - 1569332 | 4775.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

