Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)alamin adenosyltransferase | M099_1431 | Not Available | Negative | 1551913 - 1552464 | 20860.1 |
| hypothetical protein | M099_1432 | Not Available | Negative | 1552485 - 1553108 | 24621.8 |
| alpha/beta hydrolase family protein | M099_1433 | Not Available | Positive | 1553234 - 1554523 | 49915.4 |
| carboxyl transferase domain protein | M099_1434 | Not Available | Negative | 1554654 - 1556186 | 55881.1 |
| hlyd secretion family protein | M099_1435 | Not Available | Negative | 1556189 - 1556704 | 19041.9 |
| acetyl-coa carboxylase, biotin carboxylase subunit | M099_1436 | Not Available | Negative | 1556729 - 1558240 | 57013.6 |
| hypothetical protein | M099_1437 | Not Available | Negative | 1558417 - 1558773 | 14248.8 |
| acetyltransferase family protein | M099_1438 | Not Available | Negative | 1558847 - 1559332 | 18685.6 |
| acetyltransferase family protein | M099_1439 | Not Available | Positive | 1559437 - 1559868 | 16234.8 |
| acetyltransferase domain protein | M099_1440 | Not Available | Positive | 1559886 - 1560407 | 20094.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

