Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix s, arac family protein | M099_1421 | Not Available | Negative | 1540547 - 1540975 | 16435.8 |
| hypothetical protein | M099_1422 | Not Available | Negative | 1541520 - 1541633 | 4426.47 |
| 3-deoxy-d-manno-octulosonic-acid transferase family protein | M099_1423 | Not Available | Negative | 1542222 - 1543442 | 46820.4 |
| glutamate--trna ligase | M099_1424 | Not Available | Negative | 1543455 - 1544972 | 57877.2 |
| hypothetical protein | M099_1425 | Not Available | Positive | 1545054 - 1547111 | 79191.8 |
| putative protein tyrosine phosphatase | M099_1426 | Not Available | Negative | 1547086 - 1547493 | 15536.5 |
| php domain protein | M099_1427 | Not Available | Negative | 1547564 - 1548274 | 26532.1 |
| primosomal protein n' | M099_1428 | Not Available | Negative | 1548322 - 1550784 | 93875.1 |
| outer membrane beta-barrel domain protein | M099_1429 | Not Available | Negative | 1550857 - 1551456 | 21506.2 |
| hypothetical protein | M099_1430 | Not Available | Negative | 1551620 - 1551841 | 8716.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

