Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain protein | M099_1401 | Not Available | Positive | 1518575 - 1518922 | 13490.3 |
| hypothetical protein | M099_1402 | Not Available | Positive | 1518935 - 1520131 | 47330.0 |
| hypothetical protein | M099_1403 | Not Available | Positive | 1520145 - 1520273 | 4808.07 |
| hypothetical protein | M099_1404 | Not Available | Negative | 1520563 - 1520775 | 8180.31 |
| hypothetical protein | M099_1405 | Not Available | Negative | 1520878 - 1521378 | 19273.6 |
| alkaline phosphatase family protein | M099_1406 | Not Available | Positive | 1521682 - 1523100 | 51566.1 |
| competence comea helix-hairpin-helix repeat region domain protein | M099_1407 | Not Available | Negative | 1523097 - 1523999 | 35330.7 |
| neurotransmitter symporter family protein | M099_1408 | Not Available | Negative | 1524007 - 1525371 | 49207.4 |
| putative membrane protein | M099_1409 | Not Available | Positive | 1525467 - 1525853 | 14804.4 |
| rna polymerase sigma factor, sigma-70 family protein | M099_1410 | Not Available | Negative | 1525934 - 1526437 | 19779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

