Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 1512795 - 1512867 | Not Available |
| transposase family protein | M099_1392 | Not Available | Negative | 1513002 - 1513480 | 18792.5 |
| putative transposase | M099_1393 | Not Available | Negative | 1513481 - 1513771 | 10905.1 |
| hypothetical protein | M099_1394 | Not Available | Negative | 1513782 - 1514132 | 13836.2 |
| hypothetical protein | M099_1395 | Not Available | Positive | 1514233 - 1514424 | 7293.26 |
| hypothetical protein | M099_1396 | Not Available | Negative | 1514605 - 1514766 | 6267.42 |
| had hydrolase, ia, variant 1 family protein | M099_1397 | Not Available | Negative | 1514890 - 1515528 | 23851.1 |
| bacterial transferase hexapeptide family protein | M099_1398 | Not Available | Negative | 1515533 - 1516129 | 21793.6 |
| cupin domain protein | M099_1399 | Not Available | Positive | 1516240 - 1517079 | 32992.9 |
| divergent aaa domain protein | M099_1400 | Not Available | Positive | 1517157 - 1518530 | 51357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

