Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, sugar binding domain protein | M099_1379 | Not Available | Positive | 1495970 - 1497886 | 72661.6 |
| fumble family protein | M099_1380 | Not Available | Positive | 1497964 - 1498788 | 29299.7 |
| hypothetical protein | M099_1383 | Not Available | Positive | 1503020 - 1503166 | 5816.96 |
| glycerate kinase family protein | M099_1384 | Not Available | Positive | 1503191 - 1504330 | 39726.5 |
| l-fucokinase family protein | M099_1385 | Not Available | Negative | 1504317 - 1507157 | 105147.0 |
| nitroreductase family protein | M099_1386 | Not Available | Negative | 1507231 - 1507836 | 23172.8 |
| signal peptide peptidase sppa, 67k type | M099_1387 | Not Available | Positive | 1507971 - 1509752 | 65880.9 |
| tetraacyldisaccharide 4'-kinase | M099_1388 | Not Available | Positive | 1509760 - 1510860 | 42284.6 |
| purine nucleoside phosphorylase i, inosine and guanosine-specific | M099_1389 | Not Available | Positive | 1510868 - 1511632 | 28135.1 |
| thiamine-monophosphate kinase | M099_1390 | Not Available | Positive | 1511637 - 1512677 | 38271.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

