Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | M099_0113 | Not Available | Positive | 129714 - 130439 | 28652.8 |
| hypothetical protein | M099_0114 | Not Available | Negative | 130579 - 130701 | 4682.02 |
| hypothetical protein | M099_0115 | Not Available | Positive | 130886 - 131005 | 4505.5 |
| yqey-like family protein | M099_0116 | Not Available | Negative | 130980 - 131429 | 15932.5 |
| cell division protein ftsz | M099_0117 | Not Available | Negative | 131451 - 132737 | 47260.2 |
| cell division protein ftsa | M099_0118 | Not Available | Negative | 132793 - 134295 | 54956.8 |
| putative cell division protein | M099_0119 | Not Available | Negative | 134299 - 135036 | 27832.3 |
| udp-n-acetylmuramate--alanine ligase | M099_0120 | Not Available | Negative | 135033 - 136409 | 51118.3 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | M099_0121 | Not Available | Negative | 136399 - 137529 | 40466.6 |
| cell cycle family protein | M099_0122 | Not Available | Negative | 137594 - 138991 | 51362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

