Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1359 | Not Available | Positive | 1476658 - 1476846 | 6843.41 |
| hypothetical protein | M099_1360 | Not Available | Negative | 1476967 - 1477407 | 16049.2 |
| dephospho-coa kinase | M099_1361 | Not Available | Negative | 1477474 - 1478070 | 22415.2 |
| ybbr-like family protein | M099_1362 | Not Available | Negative | 1478063 - 1479076 | 39038.4 |
| preprotein translocase, yajc subunit | M099_1363 | Not Available | Negative | 1479090 - 1479404 | 11609.3 |
| transcription antitermination factor nusb | M099_1364 | Not Available | Negative | 1479461 - 1480387 | 36291.4 |
| hypothetical protein | M099_1365 | Not Available | Positive | 1480583 - 1480966 | 14786.4 |
| hypothetical protein | M099_1366 | Not Available | Negative | 1480918 - 1481064 | 5636.07 |
| ribosomal protein l25, ctc-form | M099_1367 | Not Available | Positive | 1481147 - 1481743 | 21429.4 |
| peptidyl-trna hydrolase | M099_1368 | Not Available | Positive | 1481777 - 1482331 | 20213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

