Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_1349 | Not Available | Negative | 1467841 - 1468350 | 18481.4 |
| hypothetical protein | M099_1350 | Not Available | Positive | 1468484 - 1468966 | 17559.9 |
| hypothetical protein | M099_1351 | Not Available | Positive | 1469044 - 1470333 | 48246.9 |
| conserved hypothetical 698 family protein | M099_1352 | Not Available | Negative | 1470425 - 1471411 | 35078.0 |
| lysr substrate binding domain protein | M099_1353 | Not Available | Negative | 1471500 - 1472273 | 29686.1 |
| hypothetical protein | M099_1354 | Not Available | Negative | 1472409 - 1472990 | 21484.8 |
| hypothetical protein | M099_1355 | Not Available | Positive | 1473040 - 1473183 | 5440.81 |
| atp-dependent chaperone protein clpb | M099_1356 | Not Available | Positive | 1473265 - 1475853 | 97163.7 |
| hypothetical protein | M099_1357 | Not Available | Negative | 1476030 - 1476143 | 4296.26 |
| hypothetical protein | M099_1358 | Not Available | Positive | 1476494 - 1476646 | 5660.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

