Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase family protein | M099_1339 | Not Available | Positive | 1457842 - 1458717 | 33987.7 |
| triose-phosphate transporter family protein | M099_1340 | Not Available | Negative | 1458766 - 1459686 | 34775.9 |
| putative membrane protein | M099_1341 | Not Available | Negative | 1459700 - 1459813 | 4628.86 |
| phosphoglucomutase/phosphomannomutase, c-terminal domain protein | M099_1342 | Not Available | Negative | 1459869 - 1461614 | 64684.4 |
| peptidase c69 family protein | M099_1343 | Not Available | Negative | 1461928 - 1463568 | 61160.6 |
| peptidase m23 family protein | M099_1344 | Not Available | Negative | 1463611 - 1465281 | 62671.9 |
| alanine dehydrogenase | M099_1345 | Not Available | Positive | 1465475 - 1466566 | 38998.8 |
| twin arginine-targeting protein translocase tatc | M099_1346 | Not Available | Negative | 1466653 - 1467486 | 32503.9 |
| twin arginine-targeting translocase, tata/e family protein | M099_1347 | Not Available | Negative | 1467490 - 1467693 | 7276.18 |
| hypothetical protein | M099_1348 | Not Available | Negative | 1467702 - 1467821 | 4244.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

