Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain protein | M099_1319 | Not Available | Positive | 1436185 - 1437363 | 46146.3 |
| ferredoxin (flavodoxin) oxidoreductase | M099_1320 | Not Available | Positive | 1437406 - 1440951 | 129363.0 |
| transposase dde domain protein | M099_1321 | Not Available | Negative | 1441123 - 1442634 | 59191.7 |
| hypothetical protein | M099_1322 | Not Available | Negative | 1442755 - 1442874 | 4537.81 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_1323 | Not Available | Positive | 1442939 - 1444456 | 57835.4 |
| hypothetical protein | M099_1324 | Not Available | Negative | 1444627 - 1444824 | 7257.63 |
| hypothetical protein | M099_1325 | Not Available | Negative | 1444927 - 1445073 | 5553.79 |
| outer membrane beta-barrel domain protein | M099_1326 | Not Available | Negative | 1445163 - 1445939 | 29061.6 |
| hypothetical protein | M099_1327 | Not Available | Negative | 1445955 - 1446071 | 4311.23 |
| hypothetical protein | M099_1328 | Not Available | Negative | 1446625 - 1447836 | 45862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

