Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1309 | Not Available | Negative | 1423137 - 1423343 | 7806.67 |
| hypothetical protein | M099_1310 | Not Available | Positive | 1423401 - 1423520 | 4685.89 |
| hypothetical protein | M099_1311 | Not Available | Positive | 1423531 - 1423845 | 12187.8 |
| rna pseudouridylate synthase family protein | M099_1312 | Not Available | Positive | 1423893 - 1425515 | 62147.8 |
| mate efflux family protein | M099_1313 | Not Available | Negative | 1425582 - 1426943 | 49516.6 |
| cation transport family protein | M099_1314 | Not Available | Negative | 1427069 - 1428577 | 56402.7 |
| efflux transporter, rnd family, mfp subunit | M099_1315 | Not Available | Positive | 1429070 - 1430269 | 44405.6 |
| rnd transporter, hydrophobe/amphiphile efflux-1 family protein | M099_1316 | Not Available | Positive | 1430336 - 1433437 | 113097.0 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | M099_1317 | Not Available | Positive | 1433462 - 1434832 | 51664.9 |
| hypothetical protein | M099_1318 | Not Available | Negative | 1434871 - 1436082 | 45652.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

