Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1299 | Not Available | Negative | 1417633 - 1417755 | 4816.15 |
| hsp20/alpha crystallin family protein | M099_1300 | Not Available | Positive | 1418004 - 1418441 | 16963.0 |
| hypothetical protein | M099_1301 | Not Available | Positive | 1418505 - 1418627 | 4666.57 |
| hypothetical protein | M099_1302 | Not Available | Negative | 1418662 - 1418811 | 5697.18 |
| gtra-like family protein | M099_1303 | Not Available | Positive | 1418920 - 1419225 | 11753.6 |
| short chain dehydrogenase family protein | M099_1304 | Not Available | Positive | 1419242 - 1420117 | 33000.3 |
| acetyltransferase family protein | M099_1305 | Not Available | Positive | 1420160 - 1421101 | 36101.8 |
| maoc like domain protein | M099_1306 | Not Available | Negative | 1421292 - 1421756 | 17703.5 |
| hypothetical protein | M099_1307 | Not Available | Negative | 1421861 - 1422094 | 8802.73 |
| low molecular weight phosphotyrosine phosphatase family protein | M099_1308 | Not Available | Negative | 1422456 - 1422929 | 18362.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

