Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_1277 | Not Available | Negative | 1398281 - 1399120 | 31332.0 |
| tetratricopeptide repeat family protein | M099_1278 | Not Available | Negative | 1399309 - 1400724 | 53344.0 |
| pbp superfamily domain protein | M099_1279 | Not Available | Negative | 1400748 - 1401692 | 34373.7 |
| tonb family c-terminal domain protein | M099_1280 | Not Available | Negative | 1401702 - 1402514 | 30376.9 |
| biopolymer transport exbd/tolr family protein | M099_1281 | Not Available | Negative | 1402544 - 1403194 | 24262.1 |
| biopolymer transport exbd/tolr family protein | M099_1282 | Not Available | Negative | 1403207 - 1403812 | 22770.7 |
| mota/tolq/exbb proton channel family protein | M099_1283 | Not Available | Negative | 1403841 - 1404656 | 28918.5 |
| hypothetical protein | M099_1284 | Not Available | Negative | 1404763 - 1405125 | 13727.5 |
| helicase conserved c-terminal domain protein | M099_1287 | Not Available | Positive | 1406097 - 1410148 | 153871.0 |
| hypothetical protein | M099_1288 | Not Available | Negative | 1410212 - 1410868 | 25628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

