Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0103 | Not Available | Negative | 118120 - 118365 | 9481.4 |
| putative lipoprotein | M099_0104 | Not Available | Negative | 118505 - 120991 | 89607.7 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_0105 | Not Available | Negative | 121064 - 121549 | 19083.2 |
| hypothetical protein | M099_0106 | Not Available | Positive | 121893 - 122045 | 5888.13 |
| major facilitator superfamily protein | M099_0107 | Not Available | Negative | 122255 - 123610 | 49078.2 |
| 4-alpha-glucanotransferase | M099_0108 | Not Available | Negative | 123684 - 126362 | 104540.0 |
| hypothetical protein | M099_0109 | Not Available | Positive | 126463 - 126594 | 4962.17 |
| dna gyrase, b subunit | M099_0110 | Not Available | Negative | 126690 - 128654 | 72969.4 |
| ribosomal protein s20 | M099_0111 | Not Available | Negative | 129102 - 129356 | 9698.07 |
| Trna-glu | Not Available | Not Available | Positive | 129396 - 129470 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

