Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1247 | Not Available | Negative | 1375836 - 1376327 | 19631.6 |
| trna threonylcarbamoyl adenosine modification protein yeaz | M099_1248 | Not Available | Negative | 1376509 - 1377198 | 25285.7 |
| hypothetical protein | M099_1249 | Not Available | Positive | 1377200 - 1377322 | 4975.27 |
| hypothetical protein | M099_1250 | Not Available | Positive | 1377294 - 1378169 | 33853.6 |
| guanylate kinase | M099_1251 | Not Available | Positive | 1378216 - 1378785 | 21367.4 |
| hypothetical protein | M099_1252 | Not Available | Positive | 1378790 - 1378972 | 6793.87 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | M099_1253 | Not Available | Positive | 1378954 - 1379526 | 22152.7 |
| hypothetical protein | M099_1254 | Not Available | Negative | 1379609 - 1380067 | 17737.3 |
| calcineurin-like phosphoesterase family protein | M099_1255 | Not Available | Negative | 1380307 - 1381146 | 31368.6 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | M099_1256 | Not Available | Positive | 1381220 - 1382110 | 32646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

