Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1207 | Not Available | Negative | 1328587 - 1328778 | 6973.57 |
| peptidase m23 family protein | M099_1208 | Not Available | Negative | 1328782 - 1329321 | 19874.9 |
| b3/4 domain protein | M099_1209 | Not Available | Negative | 1329415 - 1330074 | 24397.2 |
| multi-copper polyphenol oxidoreductase laccase family protein | M099_1210 | Not Available | Negative | 1330114 - 1330896 | 28811.3 |
| obg family gtpase cgta | M099_1211 | Not Available | Negative | 1330893 - 1332002 | 41465.1 |
| adenylate kinase family protein | M099_1212 | Not Available | Negative | 1332193 - 1332762 | 20885.2 |
| hypoxanthine phosphoribosyltransferase | M099_1213 | Not Available | Negative | 1332803 - 1333339 | 20092.5 |
| pfkb carbohydrate kinase family protein | M099_1214 | Not Available | Positive | 1333459 - 1334994 | 56205.5 |
| hypothetical protein | M099_1215 | Not Available | Positive | 1335031 - 1336080 | 38630.6 |
| major facilitator superfamily protein | M099_1216 | Not Available | Negative | 1336162 - 1337550 | 51163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

