Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | M099_1197 | Not Available | Negative | 1318876 - 1319604 | 28041.5 |
| n-terminal domain of dj-1_pfpi family protein | M099_1198 | Not Available | Negative | 1319626 - 1320321 | 25803.2 |
| outer membrane efflux family protein | M099_1199 | Not Available | Negative | 1320462 - 1321586 | 42197.3 |
| mmpl family protein | M099_1200 | Not Available | Negative | 1321642 - 1322467 | 30219.3 |
| hypothetical protein | M099_1201 | Not Available | Negative | 1322976 - 1323110 | 4994.07 |
| aicarft/impchase bienzyme family protein | M099_1202 | Not Available | Positive | 1323260 - 1324435 | 43918.3 |
| hypothetical protein | M099_1203 | Not Available | Positive | 1324581 - 1325939 | 53151.0 |
| outer membrane beta-barrel domain protein | M099_1204 | Not Available | Negative | 1326220 - 1326891 | 24189.6 |
| outer membrane beta-barrel domain protein | M099_1205 | Not Available | Negative | 1327037 - 1327642 | 21310.4 |
| outer membrane beta-barrel domain protein | M099_1206 | Not Available | Negative | 1327846 - 1328382 | 19622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

