Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form family protein | M099_1177 | Not Available | Negative | 1285547 - 1286758 | 44511.4 |
| aspartate kinase domain protein | M099_1178 | Not Available | Negative | 1286763 - 1289195 | 88625.7 |
| hypothetical protein | M099_1179 | Not Available | Negative | 1289549 - 1289692 | 5584.33 |
| dna repair protein rada | M099_1180 | Not Available | Positive | 1289723 - 1291090 | 49904.5 |
| hypothetical protein | M099_1181 | Not Available | Positive | 1291130 - 1291780 | 24388.4 |
| glucose inhibited division a family protein | M099_1182 | Not Available | Positive | 1291786 - 1293429 | 60702.7 |
| bacterial regulatory s, luxr family protein | M099_1183 | Not Available | Positive | 1293584 - 1294177 | 22261.1 |
| tonb dependent receptor family protein | M099_1184 | Not Available | Positive | 1294347 - 1296773 | 92201.1 |
| putative membrane protein | M099_1185 | Not Available | Negative | 1297014 - 1297976 | 36768.0 |
| peptidase u32 family protein | M099_1186 | Not Available | Negative | 1297963 - 1299792 | 69855.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

