Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb dependent receptor family protein | M099_1167 | Not Available | Positive | 1276122 - 1278143 | 76079.0 |
| hypothetical protein | M099_1168 | Not Available | Positive | 1278213 - 1279265 | 39451.2 |
| divergent aaa domain protein | M099_1169 | Not Available | Positive | 1279430 - 1279669 | 8787.66 |
| atp-dependent dna helicase recg family protein | M099_1170 | Not Available | Positive | 1279657 - 1280280 | 22977.9 |
| periplasmic binding family protein | M099_1171 | Not Available | Positive | 1280282 - 1281409 | 41796.8 |
| hypothetical protein | M099_1172 | Not Available | Negative | 1281422 - 1281556 | 4952.22 |
| feccd transport family protein | M099_1173 | Not Available | Positive | 1281525 - 1282556 | 36079.6 |
| abc transporter family protein | M099_1174 | Not Available | Positive | 1282556 - 1283563 | 37216.9 |
| hypothetical protein | M099_1175 | Not Available | Negative | 1283611 - 1283751 | 5215.35 |
| threonine synthase | M099_1176 | Not Available | Negative | 1284155 - 1285456 | 47723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

